Variables
int	visible
	visibility flag : 0=hidden, 1=opaque (-1 is used in 3D for transparent objects)

gle_color	color
	color of fiber

int	coloring
	if true, use different colors to display some property of the fibers More...

real	line_width
	width of lines (also known as `line`[0])

int	line_style
	style for lines (also known as `line`[1]) More...

real	point_size
	size of points (also known as `point`[0]) More...

int	point_style
	style for display of points (also known as `point`[1]) More...

int	end_style [2]
	style of fiber tips for { PLUS_END, MINUS_END } More...

real	end_size [2]
	size of fiber tips for { PLUS_END, MINUS_END } More...

real	end_section [2]
	length of a section displayed near the fiber tips More...

gle_color	end_color [5]
	colors of the different FiberTip states More...

int	speckle_style
	style for speckle display (also know as speckles) More...

real	interval
	distance between speckles (also known as `speckles`[1])

int	exclude
	a bit-field to hide certain categories of fibers More...

Vector	right
	the reference direction used for hiding left- or right-pointing fibers, etc. (also known as `exclude`[1])

unsigned int	mask
	period used to attribute colors with the coloring option

int	phase
	phase used to attribute colors with the coloring option (also known as `mask`[1])

real	rainbow
	conversion coefficient from tension to color, for line_style==2 More...

real	forces
	( if > 0 ) display the net forces FP acting on model points More...

int	explode
	the 'explosion' effect shift the fibers in space More...

real	explode_range
	amount of lateral shift to separate fibers when display is exploded (known as `explode`[1])

int	show_average
	if true, display the average fiber More...

Detailed Description

Variable Documentation

int coloring

Values for coloring:

0 : no coloring,
1 : color fibers according to ID-number,
2 : color fibers depending on direction,
3 : color fibers depending on the mark,
4 : color fibers by connectivity.

gle_color end_color[5]

This determines the set of color that are used to display the fiber tips, according to their assembly state (Fiber::dynamicState):

static ends (dynamic-state 0) use end_color[0],
growing end (dynamic-state 1), use end_color[1],
shrinking end (dynamic-state 4), use end_color[4]

real end_section[2]

if end_section[0] > 0, a section near the PLUS_ENDD is displayed with the color of the PLUS_END. if end_section[1] > 0, a section near the MINUS_END is displayed with the color of the MINUS_END.

real end_size[2]

You can also specify:

plus_end = SIZE, STYLE

minus_end = SIZE, STYLE

int end_style[2]

end_style[0] determines the style of the PLUS_END, and end_style[1] the style of the MINUS_END.

Possible end_style:

0 : hide,
1 : display a disc/sphere,
2 : display a cone,
3 : display a disc,
4 : draw arrowhead,
5 : draw arrowhead in the inverted direction (for actin)

int exclude

Possible values for exclude:

0 : all fibers are displayed,
1 : show only right-pointing fibers,
2 : show only left-pointing fibers,
4 : show only counter-clockwise fibers,
8 : show only clockwise fibers.

You may also address each bit directly, knowning that:

bit 1 on: hide left-pointing fibers
bit 2 on: hide right-pointing fibers
bit 3 on: hide clockwise fibers
bit 4 on: hide counter-clockwise fibers

int explode

This can be useful to visualize dense regions, but is only implemented for style=2

real forces

The force is displayed as segments of length forces*PF. A color can be specified as forces[1]

int line_style

Possible line_style:

0 : hide,
1 : plain lines,
2 : rainbow coloring based on compressive forces,
3 : color set by the angle of the fiber in XY plane,
4 : local color gradient that indicates polarity.

real point_size

point_size and line_width are normally set in pixels, but if display:point_value is set, their value is understood in multiples of point_value, which itself is a distance.

For example, if you set line_width=2.5 and point_value=0.01, the fibers will be displayed with a diameter of 0.025.

int point_style

Possible point_style:

0 : hide,
1 : show model points,
2 : show arrow-heads along fiber, separated by interval,
3 : indicate abscissa.

real rainbow

Possible values for rainbow:

0 : disabled,
rainbow > 0 : compressive forces are highlighted in red,
rainbow < 0 : traction/elongation forces are highlighted.

int show_average

The 'average fiber' is calculated from the centroid of the fiber tips, and the centroid of the polymer mass. It is useful to evaluate the amount of order in the network.

int speckle_style

Possible speckle_style:

0 : hide,
1 : random speckles, separated on average by interval,
2 : regular speckes, separated by interval.

Variables

Detailed Description

Variable Documentation